Revisiting the Validation of the KID Methodology through CDFT Descriptors of Fluorescent DNA Staining Dyes

Authors

  • Norma Flores-Holguin Laboratorio Virtual NANOCOSMOS, Departamento de Medio Ambiente y Energia´, Centro de Investigacion en Materiales Avanzados, Chihuahua, Chih 31136, Mexico.
  • Juan Frau Departament de Qu´imica, Facultad de Ciencias, Universitat de les Illes Balears, Palma de Mallorca, E-07122, Spain.
  • Daniel Glossman-Mitnik Laboratorio Virtual NANOCOSMOS, Departamento de Medio Ambiente y Energ´ia, Centro de Investigacion en Materiales Avanzados, Chihuahua, Chih 31136, Mexico.

DOI:

https://doi.org/10.9734/bpi/cacs/v2/2422F

Keywords:

Computational Chemistry, Molecular Modeling, DNA Staining Dyes, Conceptual DFT, Chemical Reactivity Theory

Abstract

The fulfillment of the ”Koopmans’ theorem in DFT” or KID methodology is verified by means of the calculation of several global descriptors arising from Conceptual DFT. They have been calculated through a \(\triangle\)SCF procedure, and by means of the HOMO and LUMO frontier orbitals. The latest Minnesota family of density functionals has been considered and three fluorescent DNA staining dyes have been studied: Hoechst 33258, Hoechst 33342 and Hoechst 34580. On the basis of the obtained Conceptual DFT indices, a series of descriptors have been devised in order to determine the accuracy of each model chemistry considered here in the verification of the mentioned theorem. It is shown that the only density functionals that fulfill this task are those denoted as range-separated hybrids (RSH), while the local density functionals are not useful at all.

Published

2021-07-26

How to Cite

Norma Flores-Holguin, Juan Frau, & Daniel Glossman-Mitnik. (2021). Revisiting the Validation of the KID Methodology through CDFT Descriptors of Fluorescent DNA Staining Dyes. Challenges and Advances in Chemical Science Vol. 2, 30–44. https://doi.org/10.9734/bpi/cacs/v2/2422F